Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885152.1_cds_XP_016439135.1_34720
CDS Infomation

[gene=LOC107765055] [db_xref=GeneID:107765055] [protein=dnaJ protein ERDJ2A-like isoform X1] [protein_id=XP_016439135.1] [location=join(86354..86539,86655..86750,86909..87029,87211..87317,87439..87656,88861..89038,89134..89253,90158..90244,92132..92242,92788..93609)] [gbkey=CDS]
Sequence

ATGGCTGACTCTGGAGAGAATAGTGCCTTATTCCCCATTTTTATATTGTCAGTAATTGCC
CTACCCTTAGTACCCTATACAATACTTAAATTACTTCGTGCTGCTTCAAAGAGGGATAAG
AGTATTCACTGTGAGTGTTCAGTTTGCTCTCGATCTGGAAAACATCACAAATCCATTTTT
CGAAGGATCTCTAGTTTTTTAACGTGTAGCAACCTGACTGTGCTGCTGCTCTGGGTCATT
GTGGCCTTCCTTGTTTATTCCATCAAGCAAAGTAGTCGTGAGATTGAAGCTTTTGATCCA
TTCAGTATTCTTGGGCTAGAACCAGGAGTTTCGGAATCTGTAATAAAGAAGGCTTATAGG
AGACTTTCAATACAATACCATCCAGACAAAAACCCCGATCCAGCTGCTAATAAGTATTTC
GTGGAGTATATTTCCAAAGCTTACCAGGCGCTGACAGATCCAGTCTCAAGGGAGAATTTT
GAGAAATATGGACATCCAGATGGCAGACAGGGTTTTCAAATGGGAATTGCACTTCCTCAG
TTTCTGCTTGATTTCAATGGCGCATCTGGTGGGATATTATTAATTTGGATTCTTGGAGGT
TTTATACTGCTGCCCATGGCATTTGGCGTTGTTTATCTATCAAGAGCATCAAAATATGGG
GGAAATTTTGTCAGGCGTGAAACTCTAGCCACTTATTTTGATCTAGTGAAACCCTCCTTG
GCTCCAAGCAAAGTTCTGGATGTCTTCATTAAGGCAGCTGAATTCATGGATATTCCAGTT
CGAAGAGCCGATGAAGAACCTCTTCAGGAACTCTTCAAACTTGTGAAAAGTGAATTGAAC
CTGGATGGTAAGAATGCCAGGCAGGAACAAGCAAAATTTTGGAAACAACATCCTGCTCTT
GTTAAGGCAGAGATGTTGATTCAAGCCCATTTACTTCGTAAGGCAGACACTTTCTCTAGT
AACTTGCAGCAAGATTACAAAAATGTGCTGCAGCTTGCGCCTCGTCTTCTCGAAGGGCTG
ATCAAGATGGCAACAGTACCACGCACTGCTAAGGGACATGGTTGGCTAAGGCCTGCAATC
GGAGTCATCGAGCTCTCCCAGTGCATAATTCAGGCCGTTCCTCTTAGTGCTAGAAAGGCA
GGTTCAGGATCCTCTGATGGTGTTGCTTCACTTTTGCAGCTTCCACATTTCAGTGATGCG
GTCATCACAAAGATAGGGAAGAAGGTGCGTACGCTACAGGACCTCCAGGACATGACCTTT
CAAGAACGTGCCGAACTGCTTTCTGGTGTTGCTGGCCTATCTGCTTCTGTATTACAAGAC
GTGGAGAAGGTACTGGAATTGATGCCTCGTGCAACAATAGAAGTTACTTGCGAGACTGAG
GGGGAGGAAGGCATACAAGAGGGGGACATTGTCACAGTGCAGGCATGGGTGACACTCAGA
CGTGCTAATGGTTTGATCTCAGCCCTTCCACACGCTCCATACTATCCATTCTCCAAGGGA
GAGAATTTCTGGTTTTTACTTGCACATACCAATTCAAATGATGTCTGGTTTTCTGAAAGT
GTCAACTTTATGGATGAAGCAGCAGCCATAACAACTGCTTCAACAATAACTGAAGCGAAA
CTGGAAGCATCGGGGGCAAGTATGGAGGAGATTACTGCTGCTGTTAAAGATGCTGTCACG
AAAGTTAAGAGCGGGTGTCGACTGGTGTTGGGCAAGATCCAAGCTCCACAGGCCGGAAAT
TACAATTTAAACTGTCATTTGATGTGTGACACATGGATTGGGTGCGACACGAAGACAAAC
TTAAAACTAAAAATATTGAAAAGGAGCAGAGCTGGAAGTCGAGGTGGTCTTGTGGCTGAG
GGAGTGCAGGGGGAGAATGGCCTTGAAGATGAAGATGACATTGAAGAAGATGAAGAGGGC
GATCAAAGTGAGTATAGTGAGGATGAGGATGAAGATGAAGAGGAAGATGAGGCTGAGGTT
GAGAAAAAGAATAATAACAGAAAGGGCTTTGCTAATGGCTCCGCTCGAAGAAAGGGTAGA
AAATAA

Peptide Sequence

PEP ID

XP_016439135.1
PEP Infomation

PREDICTED: dnaJ protein ERDJ2A-like isoform X1 [Nicotiana tabacum]
Sequence

MADSGENSALFPIFILSVIALPLVPYTILKLLRAASKRDKSIHCECSVCSRSGKHHKSIF
RRISSFLTCSNLTVLLLWVIVAFLVYSIKQSSREIEAFDPFSILGLEPGVSESVIKKAYR
RLSIQYHPDKNPDPAANKYFVEYISKAYQALTDPVSRENFEKYGHPDGRQGFQMGIALPQ
FLLDFNGASGGILLIWILGGFILLPMAFGVVYLSRASKYGGNFVRRETLATYFDLVKPSL
APSKVLDVFIKAAEFMDIPVRRADEEPLQELFKLVKSELNLDGKNARQEQAKFWKQHPAL
VKAEMLIQAHLLRKADTFSSNLQQDYKNVLQLAPRLLEGLIKMATVPRTAKGHGWLRPAI
GVIELSQCIIQAVPLSARKAGSGSSDGVASLLQLPHFSDAVITKIGKKVRTLQDLQDMTF
QERAELLSGVAGLSASVLQDVEKVLELMPRATIEVTCETEGEEGIQEGDIVTVQAWVTLR
RANGLISALPHAPYYPFSKGENFWFLLAHTNSNDVWFSESVNFMDEAAAITTASTITEAK
LEASGASMEEITAAVKDAVTKVKSGCRLVLGKIQAPQAGNYNLNCHLMCDTWIGCDTKTN
LKLKILKRSRAGSRGGLVAEGVQGENGLEDEDDIEEDEEGDQSEYSEDEDEDEEEDEAEV
EKKNNNRKGFANGSARRKGRK

Transcript Sequence

Gene sequence data has not been registered.